BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F10SP1|AL426079
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1553 1568 0.0
>3x_Contig1553
Length = 8593
Score = 1568 bits (791), Expect = 0.0
Identities = 791/791 (100%)
Strand = Plus / Plus
Query: 1 ccattagaagcatgtagccttttctgctttagcttaagcttcttcttctgattcttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccattagaagcatgtagccttttctgctttagcttaagcttcttcttctgattcttcctt 267
Query: 61 ttcttagcgtctgggcccataactgctttaacttcttcttctcaacaagctattacaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttcttagcgtctgggcccataactgctttaacttcttcttctcaacaagctattacaatt 327
Query: 121 cccgatcagaaaaaagaaaatagataaaactggtacacaataagagcaccagtgaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cccgatcagaaaaaagaaaatagataaaactggtacacaataagagcaccagtgaattta 387
Query: 181 gtaactggtcgttaacgcctgatttccaagtgctgtagaacgtctattctttgccttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtaactggtcgttaacgcctgatttccaagtgctgtagaacgtctattctttgccttttt 447
Query: 241 ttctttctgtttccgttctatttacgatgtgatttgttcagtatttattaatctgccgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttctttctgtttccgttctatttacgatgtgatttgttcagtatttattaatctgccgtt 507
Query: 301 tgcatattcaaatctttggaatcatactgtaaacacgagagggaaagacagtttattcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgcatattcaaatctttggaatcatactgtaaacacgagagggaaagacagtttattcaa 567
Query: 361 ggtcatgtggtacggatatttaattacccggacaattaattttcttaacagcttggccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ggtcatgtggtacggatatttaattacccggacaattaattttcttaacagcttggccaa 627
Query: 421 gatactaaatggctaacggtttactatgacggtaaaagaaaaaaagactgaaattcgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gatactaaatggctaacggtttactatgacggtaaaagaaaaaaagactgaaattcgata 687
Query: 481 aaaaaaatcatcttccagcgatgagatgtgatgggatgagatgagatgagttttagctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaaaaaatcatcttccagcgatgagatgtgatgggatgagatgagatgagttttagctgt 747
Query: 541 aactctgagtgggctcggttaacttgtagtgctctgtactttgaatatttggaaacagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aactctgagtgggctcggttaacttgtagtgctctgtactttgaatatttggaaacagtt 807
Query: 601 ggtcggctagtttggttcaactgtgaacagaagtatttcacggaggaaactaggataaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ggtcggctagtttggttcaactgtgaacagaagtatttcacggaggaaactaggataaat 867
Query: 661 cgataagtaatgggtcgcaaaggtaagggtccaaagaataataaacaaaagctagctcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 cgataagtaatgggtcgcaaaggtaagggtccaaagaataataaacaaaagctagctcca 927
Query: 721 gagaaggaacggttcttgcaatgttgttccgatattactattgagttgatcagttcttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gagaaggaacggttcttgcaatgttgttccgatattactattgagttgatcagttcttta 987
Query: 781 actggtggttc 791
|||||||||||
Sbjct: 988 actggtggttc 998
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,029
Number of Sequences: 1807
Number of extensions: 10029
Number of successful extensions: 385
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)